This website contains several types of documentation
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Overview provides relevant background information related to ASHLAR and more details about how ASHLAR works.
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Tutorial (coming soon!) will provides a step-by-step example workflow that will allow beginners to turn a sample of multiplexed images into a mosaic image.
- The instructions page provides a step-by-step guide for how to begin using ASHLAR.
- Running ASHLAR contains reference information on ASHLAR syntax.
- View the frequently asked questions for troubleshooting help.
- Detailed guides on how to tune ASHLAR’s options for your unique data set will be added soon.
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Roadmap will document our plans for future updates and improvements to ASHLAR.
- You may also download example data that can be processed by ASHLAR and view an example mosaic image of this data set.