R/properties.R
maximum_common_substructure.Rd
Calculate maximum common substructure (MCS) of compounds.
maximum_common_substructure(x, url = "http://127.0.0.1:8000")
x | A character vector of compounds, optionally named.
Assumed to be InChI. Specify descriptor explicitly or attach
pre-computed fingerprints using |
---|---|
url | URL to the lspcheminf python server |
A character containing the common substructure of the query compounds.
maximum_common_substructure( compounds( c( "O=C(NCc1cc(OC)c(O)cc1)CCCC/C=C/C(C)C", "CC(C)CCCCCC(=O)NCC1=CC(=C(C=C1)O)OC", "c1(C=O)cc(OC)c(O)cc1" ), descriptor = "smiles" ) )#> [1] "COC1:C:C(C):C:C:C:1O"